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Publications

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Journal Article
Solé X, Bonifaci N, López-Bigas N, Berenguer A, Hernández P, Reina O, et al. Biological convergence of cancer signatures. PloS one. 2009;4(2):e4544.
Bonifaci N, Berenguer A, Díez J, Reina O, Medina I, Dopazo J, et al. Biological processes, properties and molecular wiring diagrams of candidate low-penetrance breast cancer susceptibility genes. BMC medical genomics. 2008;1:62.
Aguilar H, Solé X, Bonifaci N, Serra-Musach J, Islam A, López-Bigas N, et al. Biological reprogramming in acquired resistance to endocrine therapy of breast cancer. Oncogene. 2010;29(45):6071-83. Abstract
Valls J, Grau M, Solé X, Hernández P, Montaner D, Dopazo J, et al. CLEAR-test: combining inference for differential expression and variability in microarray data analysis. Journal of biomedical informatics. 2008;41(1):33-45.
Bonifaci N, Palafox M, Pellegrini P, Osorio A, Benítez J, Peterlongo P, et al. Evidence for a link between TNFRSF11A and risk of breast cancer. Breast cancer research and treatment. 2011;129(3):947-54. Abstract
Hernández P, Huerta-Cepas J, Montaner D, Al-Shahrour F, Valls J, Gómez L, et al. Evidence for systems-level molecular mechanisms of tumorigenesis. BMC genomics. 2007;8:185.
Bonifaci N, Górski B, Masojć B, Wokołorczyk D, Jakubowska A, Dębniak T, et al. Exploring the Link between Germline and Somatic Genetic Alterations in Breast Carcinogenesis. PloS one. 2010;5(11):e14078. Abstract
Martrat G, Maxwell CA, Tominaga E, Porta M, Bonifaci N, Gomez-Baldo L, et al. Exploring the link between MORF4L1 and risk of breast cancer. Breast cancer research : BCR. 2011;13(2):R40. Abstract
Simarro M, Mauger D, Rhee K, Pujana MA, Kedersha NL, Yamasaki S, et al. Fas-activated serine/threonine phosphoprotein (FAST) is a regulator of alternative splicing. Proceedings of the National Academy of Sciences of the United States of America. 2007;104(27):11370-5.
Sanz-Pamplona R, Cordero D, Berenguer A, Lejbkowicz F, Rennert H, Salazar R, et al. Gene expression differences between colon and rectum tumors. Clinical cancer research : an official journal of the American Association for Cancer Research. 2011;17(23):7303-12. Abstract
Fernández-Ramires R, Solé X, De Cecco L, Llort G, Cazorla A, Bonifaci N, et al. Gene expression profiling integrated into network modelling reveals heterogeneity in the mechanisms of BRCA1 tumorigenesis. British journal of cancer. 2009;101(8):1469-80.
Medina I, Montaner D, Bonifaci N, Pujana MA, Carbonell J, Tarraga J, et al. Gene set-based analysis of polymorphisms: finding pathways or biological processes associated to traits in genome-wide association studies. Nucleic acids research. 2009;37(Web Server issue):W340-4.
Solé X, Hernández P, de Heredia ML, Armengol L, Rodríguez-Santiago B, Gómez L, et al. Genetic and genomic analysis modeling of germline c-MYC overexpression and cancer susceptibility. BMC genomics. 2008;9:12.
Maxwell CA, Moreno V, Solé X, Gómez L, Hernández P, Urruticoechea A, et al. Genetic interactions: the missing links for a better understanding of cancer susceptibility, progression and treatment. Molecular cancer. 2008;7:4.
Enjuanes A, Benavente Y, Bosch F, Martín-Guerrero I, Colomer D, Pérez-Alvarez S, et al. Genetic variants in apoptosis and immunoregulation-related genes are associated with risk of chronic lymphocytic leukemia. Cancer research. 2008;68(24):10178-86.
Hernández P, Solé X, Valls J, Moreno V, Capellá G, Urruticoechea A, et al. Integrative analysis of a cancer somatic mutome. Molecular cancer. 2007;6:13.
Maxwell CA, Benítez J, Gómez-Baldó L, Osorio A, Bonifaci N, Fernández-Ramires R, et al. Interplay between BRCA1 and RHAMM regulates epithelial apicobasal polarization and may influence risk of breast cancer. PLoS biology. 2011;9(11):e1001199. Abstract
Pujana MA, Ruiz A, Badenas C, Puig-Butille JA, Nadal M, Stark M, et al. Molecular characterization of a t(9;12)(p21;q13) balanced chromosome translocation in combination with integrative genomics analysis identifies C9orf14 as a candidate tumor-suppressor. Genes, chromosomes & cancer. 2007;46(2):155-62. Abstract
Pujana MA, Han JD, Starita LM, Stevens KN, Tewari M, Ahn JS, et al. Network modeling links breast cancer susceptibility and centrosome dysfunction. Nature genetics. 2007;39(11):1338-49.
Ogbah Z, Visa L, Badenas C, Ríos J, Puig-Butille JA, Bonifaci N, et al. Serum 25-hydroxyvitamin D3 levels and vitamin D receptor variants in melanoma patients from the Mediterranean area of Barcelona: 25-hydroxyvitamin D3 levels and VDR variants in melanoma patients from Barcelona. BMC medical genetics. 2013;14(1):26. Abstract
Gómez-Baldó L, Schmidt S, Maxwell CA, Bonifaci N, Gabaldón T, Vidalain PO, et al. TACC3-TSC2 maintains nuclear envelope structure and controls cell division. Cell cycle (Georgetown, Tex.). 2010;9(6):1143-55. Abstract
Sandoval J, Heyn HA, Moran S, Serra-Musach J, Pujana MA, Bibikova M, et al. Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome. Epigenetics : official journal of the DNA Methylation Society. 2011;6(6). Abstract